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Airy ring illustrating center intensity (left) and intensity as a function of distance (right).

Aberrations distort the image and we try to minimize the effect as much as possible. Chromatic aberrations are caused by the multiple wavelengths present in white light. Spherical aberrations are formed by focusing inside and outside the ideal focal length and caused by the imperfections within the objective lenses. Astigmatism is because of further distortions in the lens. All aberrations decrease the overall resolution of the microscope.

Electrons

Electrons are charged particles and can interact with air molecules therefore the SEM and TEM instruments require extremely high vacuum to obtain images (10 -7 atm). High vacuum ensures that very few air molecules are in the electron beam column. If the electron beam interacts with an air molecule, the air will become ionized and damage the beam filament, which is very costly to repair. The charge of the electron allows scanning and also inherently has a very small deflection angle off the source of the beam.

The electrons are generated with a thermionic filament. A tungsten (W) or LaB 6 filament is chosen based on the needs of the user. LaB 6 is much more expensive and tungsten filaments meet the needs of the average user. The microscope can be operated as field emission (tungsten filament).

Electron scattering

To accurately interpret electron microscopy images, the user must be familiar with how high energy electrons can interact with the sample and how these interactions affect the image. The probability that a particular electron will be scattered in a certain way is either described by the cross section, σ, or mean free path, λ, which is the average distance which an electron travels before being scattered.

Elastic scatter

Elastic scatter, or Rutherford scattering, is defined as a process which deflects an electron but does not decrease its energy. The wavelength of the scattered electron can be detected and is proportional to the atomic number. Elastically scattered electrons have significantly more energy that other types and provide mass contrast imaging. The mean free path, λ, is larger for smaller atoms meaning that the electron travels farther.

Inelastic scatter

Any process that causes the incoming electron to lose a detectable amount of energy is considered inelastic scattering. The two most common types of inelastic scatter are phonon scattering and plasmon scattering. Phonon scattering occurs when a primary electron looses energy by exciting a phonon, atomic vibrations in a solid, and heats the sample a small amount. A Plasmon is an oscillation within the bulk electrons in the conduction band for metals. Plasmon scattering occurs when an electron interacts with the sample and produces plasmons, which typically have 5 - 30 eV energy loss and small λ.

Secondary effects

A secondary effect is a term describing any event which may be detected outside the specimen and is essentially how images are formed. To form an image, the electron must interact with the sample in one of the aforementioned ways and escape from the sample and be detected. Secondary electrons (SE) are the most common electrons used for imaging due to high abundance and are defined, rather arbitrarily, as electrons with less than 50 eV energy after exiting the sample. Backscattered electrons (BSE) leave the sample quickly and retain a high amount of energy; however there is a much lower yield of BSE. Backscattered electrons are used in many different imaging modes. Refer to [link] for a diagram of interaction depths corresponding to various electron interactions.

Questions & Answers

how does Neisseria cause meningitis
Nyibol Reply
what is microbiologist
Muhammad Reply
what is errata
Muhammad
is the branch of biology that deals with the study of microorganisms.
Ntefuni Reply
What is microbiology
Mercy Reply
studies of microbes
Louisiaste
when we takee the specimen which lumbar,spin,
Ziyad Reply
How bacteria create energy to survive?
Muhamad Reply
Bacteria doesn't produce energy they are dependent upon their substrate in case of lack of nutrients they are able to make spores which helps them to sustain in harsh environments
_Adnan
But not all bacteria make spores, l mean Eukaryotic cells have Mitochondria which acts as powerhouse for them, since bacteria don't have it, what is the substitution for it?
Muhamad
they make spores
Louisiaste
what is sporadic nd endemic, epidemic
Aminu Reply
the significance of food webs for disease transmission
Abreham
food webs brings about an infection as an individual depends on number of diseased foods or carriers dully.
Mark
explain assimilatory nitrate reduction
Esinniobiwa Reply
Assimilatory nitrate reduction is a process that occurs in some microorganisms, such as bacteria and archaea, in which nitrate (NO3-) is reduced to nitrite (NO2-), and then further reduced to ammonia (NH3).
Elkana
This process is called assimilatory nitrate reduction because the nitrogen that is produced is incorporated in the cells of microorganisms where it can be used in the synthesis of amino acids and other nitrogen products
Elkana
Examples of thermophilic organisms
Shu Reply
Give Examples of thermophilic organisms
Shu
advantages of normal Flora to the host
Micheal Reply
Prevent foreign microbes to the host
Abubakar
they provide healthier benefits to their hosts
ayesha
They are friends to host only when Host immune system is strong and become enemies when the host immune system is weakened . very bad relationship!
Mark
what is cell
faisal Reply
cell is the smallest unit of life
Fauziya
cell is the smallest unit of life
Akanni
ok
Innocent
cell is the structural and functional unit of life
Hasan
is the fundamental units of Life
Musa
what are emergency diseases
Micheal Reply
There are nothing like emergency disease but there are some common medical emergency which can occur simultaneously like Bleeding,heart attack,Breathing difficulties,severe pain heart stock.Hope you will get my point .Have a nice day ❣️
_Adnan
define infection ,prevention and control
Innocent
I think infection prevention and control is the avoidance of all things we do that gives out break of infections and promotion of health practices that promote life
Lubega
Heyy Lubega hussein where are u from?
_Adnan
en français
Adama
which site have a normal flora
ESTHER Reply
Many sites of the body have it Skin Nasal cavity Oral cavity Gastro intestinal tract
Safaa
skin
Asiina
skin,Oral,Nasal,GIt
Sadik
How can Commensal can Bacteria change into pathogen?
Sadik
How can Commensal Bacteria change into pathogen?
Sadik
all
Tesfaye
by fussion
Asiina
what are the advantages of normal Flora to the host
Micheal
what are the ways of control and prevention of nosocomial infection in the hospital
Micheal
what is inflammation
Shelly Reply
part of a tissue or an organ being wounded or bruised.
Wilfred
what term is used to name and classify microorganisms?
Micheal Reply
Binomial nomenclature
adeolu
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Source:  OpenStax, Physical methods in chemistry and nano science. OpenStax CNX. May 05, 2015 Download for free at http://legacy.cnx.org/content/col10699/1.21
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